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    LOC105375740 uncharacterized LOC105375740 [ Homo sapiens (human) ]

    Gene ID: 105375740, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105375740
    Gene description
    uncharacterized LOC105375740
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in testis (RPKM 2.2), esophagus (RPKM 1.7) and 25 other tissues See more
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    Genomic context

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    See LOC105375740 in Genome Data Viewer
    Location:
    8q24.13
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (124568883..124580651)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (125700839..125713634)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene TatD DNase domain containing 1 Neighboring gene microRNA 6844 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27884 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27885 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27886 Neighboring gene NADH:ubiquinone oxidoreductase subunit B9 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19514 Neighboring gene MTSS I-BAR domain containing 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27887 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27888 Neighboring gene uncharacterized LOC124902016 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27889 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:125632749-125633948 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:125638519-125639718 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27890 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27891 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27892 Neighboring gene Sharpr-MPRA regulatory region 10356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27893 Neighboring gene Sharpr-MPRA regulatory region 2678 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27894 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27895 Neighboring gene Sharpr-MPRA regulatory region 8202 Neighboring gene uncharacterized LOC105375741 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:125764038-125764579

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      124568883..124580651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_928608.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      125700839..125713634
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007079406.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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