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LOC100891373 uncharacterized LOC100891373 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 100891373, updated on 12-Aug-2022

Summary

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Gene symbol
LOC100891373
Gene description
uncharacterized LOC100891373
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC100891373 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145602.1 (21814508..21902175, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577510.1 (107970..134810)

NW_022145602.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC586434 Neighboring gene protein AMN1 homolog Neighboring gene thyroid receptor-interacting protein 11-like Neighboring gene transcription factor E2F8 Neighboring gene uncharacterized LOC100890807

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC100891373

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145602.1 Reference Spur_5.0 Primary Assembly

    Range
    21814508..21902175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030987920.1 → XP_030843780.1  uncharacterized protein LOC100891373

    UniProtKB/TrEMBL
    A0A7M7NZ57
    Conserved Domains (4) summary
    COG1196
    Location:75 → 332
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02169
    Location:195 → 482
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    pfam05781
    Location:1212 → 1454
    MRVI1; MRVI1 protein
    pfam09726
    Location:971 → 1279
    Macoilin; Macoilin family
Nucleotide Protein
Heading Accession and Version

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