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LOC100889870 atrial natriuretic peptide receptor 1 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 100889870, updated on 14-Dec-2023

Summary

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Gene symbol
LOC100889870
Gene description
atrial natriuretic peptide receptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC100889870 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145609.1 (17271163..17300547)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577921.1 (118395..125972)

NW_022145609.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115928510 Neighboring gene eukaryotic translation initiation factor 2B subunit gamma Neighboring gene methylcrotonoyl-CoA carboxylase beta chain, mitochondrial Neighboring gene uncharacterized LOC115928511

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanylate cyclase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptide receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor guanylyl cyclase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
atrial natriuretic peptide receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145609.1 Reference Spur_5.0 Primary Assembly

    Range
    17271163..17300547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030996442.1 → XP_030852302.1  atrial natriuretic peptide receptor 1

    UniProtKB/TrEMBL
    A0A7M7PK49
    Conserved Domains (3) summary
    smart00044
    Location:339 → 531
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    cd14045
    Location:35 → 304
    PK_GC_unk; Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors
    pfam07701
    Location:305 → 360
    HNOBA; Heme NO binding associated
Nucleotide Protein
Heading Accession and Version

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