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    LOC100644648 toll-like receptor Tollo [ Bombus terrestris (buff-tailed bumblebee) ]

    Gene ID: 100644648, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC100644648
    Gene description
    toll-like receptor Tollo
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bombus terrestris
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
    Orthologs
    honey bee all
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    Genomic context

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    See LOC100644648 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current iyBomTerr1.2 (GCF_910591885.1) 10 NC_063278.1 (10795171..10802122, complement)
    102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B10 NC_015771.1 (10382061..10390152, complement)

    Chromosome 10 - NC_063278.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 14 Neighboring gene uncharacterized LOC125385847 Neighboring gene uncharacterized LOC125385848 Neighboring gene uncharacterized LOC110119629 Neighboring gene Hillarin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    toll-like receptor Tollo

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iyBomTerr1.2

    Genomic

    1. NC_063278.1 Reference iyBomTerr1.2

      Range
      10795171..10802122 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003398378.4 → XP_003398426.1  toll-like receptor Tollo

      UniProtKB/TrEMBL
      A0A9B0CCC1
      Conserved Domains (7) summary
      smart00013
      Location:760 → 797
      LRRNT; Leucine rich repeat N-terminal domain
      COG4886
      Location:213 → 624
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00116
      Location:153 → 320
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:213 → 236
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:817 → 877
      LRR_8; Leucine rich repeat
      cl15307
      Location:679 → 737
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
      cl23749
      Location:1043 → 1178
      TIR_2; TIR domain
    Nucleotide Protein
    Heading Accession and Version

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