U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.
    • Unknown field was ignored: [has_clinical].

    LOC100494672 1-phosphatidylinositol phosphodiesterase [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100494672, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LOC100494672provided by Xenbase
    Official Full Name
    1-phosphatidylinositol phosphodiesteraseprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-29082307
    See related
    Ensembl:ENSXETG00000034321
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100494672 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (146851636..146854318)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (133741347..133745950)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene extracellular calcium-sensing receptor-like Neighboring gene extracellular calcium-sensing receptor-like Neighboring gene protein mono-ADP-ribosyltransferase TIPARP Neighboring gene protein mono-ADP-ribosyltransferase TIPARP Neighboring gene protein mono-ADP-ribosyltransferase TIPARP

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables phosphoric diester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC100494672

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      146851636..146854318
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002940825.5 → XP_002940871.2  uncharacterized protein LOC100494672

      UniProtKB/TrEMBL
      A0A6I8Q2Q3
      Related
      ENSXETP00000063606.2, ENSXETT00000063217.3
      Conserved Domains (1) summary
      cd08586
      Location:38 → 291
      PI-PLCc_BcPLC_like; Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins

    2. XM_018092753.2 → XP_017948242.1  uncharacterized protein LOC100494672

      UniProtKB/TrEMBL
      A0A6I8Q2Q3
      Conserved Domains (1) summary
      cd08586
      Location:38 → 291
      PI-PLCc_BcPLC_like; Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.