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    LOC100492970 extracellular calcium-sensing receptor [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100492970, updated on 4-Nov-2024

    Summary

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    Official Symbol
    LOC100492970provided by Xenbase
    Official Full Name
    extracellular calcium-sensing receptorprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-29081447
    See related
    Ensembl:ENSXETG00000037789 AllianceGenome:Xenbase:XB-GENE-29081447
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See LOC100492970 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (145835788..145840975)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (132816814..132822112)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene extracellular calcium-sensing receptor Neighboring gene extracellular calcium-sensing receptor Neighboring gene extracellular calcium-sensing receptor Neighboring gene extracellular calcium-sensing receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    extracellular calcium-sensing receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      145835788..145840975
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012960279.1 → XP_012815733.1  extracellular calcium-sensing receptor

      UniProtKB/TrEMBL
      A0A8J0SK26, F7BSJ0
      Related
      ENSXETP00000023127.3, ENSXETT00000023127.4
      Conserved Domains (4) summary
      pfam00003
      Location:582 → 813
      7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
      pfam01094
      Location:47 → 450
      ANF_receptor; Receptor family ligand binding region
      pfam07562
      Location:494 → 544
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:10 → 484
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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