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    LOC100492187 DNA (cytosine-5)-methyltransferase 3A [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100492187, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LOC100492187provided by Xenbase
    Official Full Name
    DNA (cytosine-5)-methyltransferase 3Aprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-29081059
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    See LOC100492187 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (10726337..10734907, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (5208178..5223391, complement)

    Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116407680 Neighboring gene uncharacterized LOC116407735 Neighboring gene olfactory receptor family 10 subfamily BP member 1B Neighboring gene olfactory receptor family 10 subfamily BP member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within methylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DNA (cytosine-5)-methyltransferase 3A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      10726337..10734907 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031893791.1 → XP_031749651.1  DNA (cytosine-5)-methyltransferase 3A

      UniProtKB/TrEMBL
      A0A8J1IYT3
      Conserved Domains (2) summary
      cl28890
      Location:4 → 62
      FYVE_like_SF; FYVE domain like superfamily
      cl30459
      Location:82 → 354
      Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...
    Nucleotide Protein Strain
    Heading Accession and Version

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