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    LOC100490677 extracellular calcium-sensing receptor [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100490677, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LOC100490677provided by Xenbase
    Official Full Name
    extracellular calcium-sensing receptorprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-29080303
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    See LOC100490677 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (146415511..146421566, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (133321538..133330658, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene vomeronasal type-2 receptor 26-like Neighboring gene vomeronasal type-2 receptor 26

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    extracellular calcium-sensing receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      146415511..146421566 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031898289.1 → XP_031754149.1  extracellular calcium-sensing receptor

      UniProtKB/TrEMBL
      A0A8J1J8G3, F6QRA6
      Conserved Domains (4) summary
      pfam07562
      Location:414 → 446
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cd14964
      Location:467 → 491
      7tm_GPCRs; TM helix 1 [structural motif]
      cl10011
      Location:13 → 406
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily
      cl28897
      Location:467 → 717
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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