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    fam98a family with sequence similarity 98 member A [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100488558, updated on 6-Jun-2024

    Summary

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    Official Symbol
    fam98aprovided by Xenbase
    Official Full Name
    family with sequence similarity 98 member Aprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-29079259
    See related
    Ensembl:ENSXETG00000019357
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See fam98a in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (46822960..46832830, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (57002796..57012742, complement)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116410890 Neighboring gene HEAT repeat containing 5B Neighboring gene RAS guanyl releasing protein 3 Neighboring gene uncharacterized LOC116410879 Neighboring gene phosphatidylinositol polyphosphate 5-phosphatase type IV pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    family with sequence similarity 98 member A; protein FAM98A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001428211.1 → NP_001415140.1  family with sequence similarity 98 member A

      Status: VALIDATED

      Source sequence(s)
      AAMC04000005
      UniProtKB/TrEMBL
      A0A6I8SFI7, A0A803JH71

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      46822960..46832830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004914667.4 → XP_004914724.1  protein FAM98A

      Related
      ENSXETP00000095839.1, ENSXETT00000095816.2
      Conserved Domains (1) summary
      pfam10239
      Location:11 → 327
      DUF2465; Protein of unknown function (DUF2465)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.