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    KRT18P28 keratin 18 pseudogene 28 [ Homo sapiens (human) ]

    Gene ID: 343326, updated on 17-Sep-2024

    Summary

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    Official Symbol
    KRT18P28provided by HGNC
    Official Full Name
    keratin 18 pseudogene 28provided by HGNC
    Primary source
    HGNC:HGNC:33397
    See related
    Ensembl:ENSG00000176855 AllianceGenome:HGNC:33397
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See KRT18P28 in Genome Data Viewer
    Location:
    1q25.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (182959019..182960412, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (182318191..182319584, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (182928154..182929547, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene SHC binding and spindle associated 1 like Neighboring gene natural cytotoxicity triggering receptor 1 pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:182926694-182927204 Neighboring gene RNA, 5S ribosomal pseudogene 71 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:182927205-182927716 Neighboring gene Sharpr-MPRA regulatory region 8189 Neighboring gene RNA, U6 small nuclear 41, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:182990015-182990514 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:182991808-182992362 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:182991252-182991807 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1625 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:182992918-182993471 Neighboring gene MPRA-validated peak499 silencer Neighboring gene laminin subunit gamma 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1627 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2209 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2210 Neighboring gene Sharpr-MPRA regulatory region 7713 Neighboring gene LAMC1 antisense RNA 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_009661.1 

      Range
      101..1494
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      182959019..182960412 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      182318191..182319584 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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