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    Ighv1-39 immunoglobulin heavy variable 1-39 [ Mus musculus (house mouse) ]

    Gene ID: 780891, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Ighv1-39provided by MGI
    Official Full Name
    immunoglobulin heavy variable 1-39provided by MGI
    Primary source
    MGI:MGI:4439888
    See related
    IMGT/GENE-DB:IGHV1-39; AllianceGenome:MGI:4439888
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm16964
    Summary
    Predicted to enable antigen binding activity. Predicted to be involved in immunoglobulin mediated immune response. Orthologous to several human genes including IGHV1-18 (immunoglobulin heavy variable 1-18); IGHV1-2 (immunoglobulin heavy variable 1-2); and IGHV1-24 (immunoglobulin heavy variable 1-24). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Ighv1-39 in Genome Data Viewer
    Location:
    12 F2; 12 62.46 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (114878219..114878512, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (114914599..114914892, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin heavy chain complex Neighboring gene STARR-seq mESC enhancer starr_33397 Neighboring gene immunoglobulin heavy variable 1-37 Neighboring gene immunoglobulin heavy variable V1-38 Neighboring gene immunoglobulin heavy variable V1-40 Neighboring gene immunoglobulin heavy variable 1-41

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Giudicelli V, et al. Nucleic Acids Res, 2005 Jan 1. PMID 15608191, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • immunoglobulin heavy variable V1-39

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables antigen binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in immunoglobulin mediated immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_005838.1 

      Range
      1667003..1667296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      114878219..114878512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.