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    H2BC27P H2B clustered histone 27, pseudogene [ Homo sapiens (human) ]

    Gene ID: 337872, updated on 17-Sep-2024

    Summary

    Official Symbol
    H2BC27Pprovided by HGNC
    Official Full Name
    H2B clustered histone 27, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:20515
    See related
    Ensembl:ENSG00000181201 AllianceGenome:HGNC:20515
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    H2BU2P; HIST3H2BA
    Summary
    Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 1. [provided by RefSeq, Oct 2015]
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    Genomic context

    See H2BC27P in Genome Data Viewer
    Location:
    1q42.13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (228464170..228464575, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (227652682..227653087, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (228651871..228652276, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:228645697-228646283 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:228646284-228646869 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2695 Neighboring gene H2B clustered histone 26 Neighboring gene microRNA 4666a Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228658552-228659062 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228663712-228664547 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228673961-228674822 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228674823-228675683 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228675801-228676529 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228676530-228677257 Neighboring gene Sharpr-MPRA regulatory region 4602 Neighboring gene ring finger protein 187 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228680575-228681520 Neighboring gene Sharpr-MPRA regulatory region 4759 Neighboring gene uncharacterized LOC105373124 Neighboring gene butyrophilin like 10, pseudogene

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • H2B.U histone 2, pseudogene
    • histone 3, H2ba
    • histone cluster 3 H2B family member a (pseudogene)
    • histone cluster 3, H2ba (pseudogene)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002618.3 

      Range
      101..506
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      228464170..228464575 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_018654708.1 Reference GRCh38.p14 PATCHES

      Range
      55369..55774 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      227652682..227653087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)