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    LOC100784317 homeobox protein knotted-1-like 3 [ Glycine max (soybean) ]

    Gene ID: 100784317, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100784317
    Gene description
    homeobox protein knotted-1-like 3
    Locus tag
    GLYMA_17G215500v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100784317 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 17 NC_038253.2 (36167931..36173128, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 17 NC_038253.1 (36212499..36217700, complement)

    Chromosome 17 - NC_038253.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100783788 Neighboring gene uncharacterized LOC102661662 Neighboring gene uncharacterized LOC102659486 Neighboring gene trafficking protein particle complex II-specific subunit 120 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein knotted-1-like 3
    Names
    homeodomain/HOMEOBOX transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038253.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      36167931..36173128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006601109.4 → XP_006601172.1  homeobox protein knotted-1-like 3 isoform X2

      Conserved Domains (4) summary
      pfam03789
      Location:308 → 329
      ELK; ELK domain
      pfam03790
      Location:143 → 182
      KNOX1; KNOX1 domain
      pfam03791
      Location:200 → 250
      KNOX2; KNOX2 domain
      pfam05920
      Location:348 → 387
      Homeobox_KN; Homeobox KN domain

    2. XM_006601108.4 → XP_006601171.1  homeobox protein knotted-1-like 3 isoform X1

      UniProtKB/TrEMBL
      A0A0K2CT26, I1MWX1
      Conserved Domains (3) summary
      pfam03790
      Location:143 → 182
      KNOX1; KNOX1 domain
      pfam03791
      Location:200 → 250
      KNOX2; KNOX2 domain
      pfam05920
      Location:348 → 387
      Homeobox_KN; Homeobox KN domain

    3. XM_003550152.4 → XP_003550200.1  homeobox protein knotted-1-like 3 isoform X3

      UniProtKB/TrEMBL
      I1MWX2
      Conserved Domains (3) summary
      pfam03790
      Location:143 → 182
      KNOX1; KNOX1 domain
      pfam03791
      Location:200 → 250
      KNOX2; KNOX2 domain
      pfam05920
      Location:348 → 387
      Homeobox_KN; Homeobox KN domain
    Nucleotide Protein
    Heading Accession and Version

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