U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    BZIP105 bZIP transcription factor bZIP105 [ Glycine max (soybean) ]

    Gene ID: 778137, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    BZIP105
    Gene description
    bZIP transcription factor bZIP105
    Locus tag
    GLYMA_03G247100v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BZIP105 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 3 NC_016090.4 (45564979..45569346)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 3 NC_016090.3 (44393662..44398029)

    Chromosome 3 - NC_016090.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100794252 Neighboring gene GDP-mannose 3,5-epimerase 2 Neighboring gene sec-independent protein translocase protein TATA, chloroplastic Neighboring gene mediator of RNA polymerase II transcription subunit 14

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Liao Y, et al. Planta, 2008 Jul. PMID 18365246
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    bZIP transcription factor bZIP105

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001250184.2 → NP_001237113.2  bZIP transcription factor bZIP105

      Status: VALIDATED

      Source sequence(s)
      ACUP04001230
      UniProtKB/TrEMBL
      I1JRM9, Q0GPG5
      Conserved Domains (2) summary
      cd14702
      Location:227 → 278
      bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
      pfam12498
      Location:293 → 406
      bZIP_C; Basic leucine-zipper C terminal

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016090.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      45564979..45569346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases