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    SOYSTGA bZIP transcription factor [ Glycine max (soybean) ]

    Gene ID: 548066, updated on 7-Dec-2023

    Summary

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    Gene symbol
    SOYSTGA
    Gene description
    bZIP transcription factor
    Locus tag
    GLYMA_11G236300v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    Also known as
    BZIP52; bZIP76; GmTGA15
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    Genomic context

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    See SOYSTGA in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 11 NC_038247.2 (37991511..37997617, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (33112560..33118379, complement)

    Chromosome 11 - NC_038247.2Genomic Context describing neighboring genes Neighboring gene glutathione hydrolase 1 Neighboring gene glutathione hydrolase 1 Neighboring gene alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial Neighboring gene uncharacterized LOC121173087 Neighboring gene uncharacterized LOC100820355 Neighboring gene uncharacterized LOC100306576

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-Wide Characterization and Expression Analysis of Soybean TGA Transcription Factors Identified a Novel TGA Gene Involved in Drought and Salt Tolerance. Li B, et al. Front Plant Sci, 2019. PMID 31156656, Free PMC Article
    2. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Liao Y, et al. Planta, 2008 Jul. PMID 18365246

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bZIP transcription factor
    Names
    TGACG-motif-binding protein
    bZIP transcription factor bZIP52
    putative bZIP domain class transcription factor
    transcription factor bZIP76

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001251358.2 → NP_001238287.2  bZIP transcription factor

      Status: VALIDATED

      Source sequence(s)
      ACUP04004034, L28005
      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038247.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      37991511..37997617 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041006474.1 → XP_040862408.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    2. XM_006590311.4 → XP_006590374.1  bZIP transcription factor isoform X1

      See identical proteins and their annotated locations for XP_006590374.1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    3. XM_041006471.1 → XP_040862405.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    4. XM_006590308.4 → XP_006590371.1  bZIP transcription factor isoform X1

      See identical proteins and their annotated locations for XP_006590371.1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    5. XM_006590307.4 → XP_006590370.1  bZIP transcription factor isoform X1

      See identical proteins and their annotated locations for XP_006590370.1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    6. XM_041006468.1 → XP_040862402.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    7. XM_006590306.4 → XP_006590369.1  bZIP transcription factor isoform X1

      See identical proteins and their annotated locations for XP_006590369.1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    8. XM_041006467.1 → XP_040862401.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    9. XM_041006463.1 → XP_040862397.1  bZIP transcription factor isoform X1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    10. XM_006590309.3 → XP_006590372.1  bZIP transcription factor isoform X1

      See identical proteins and their annotated locations for XP_006590372.1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    11. XM_041006465.1 → XP_040862399.1  bZIP transcription factor isoform X1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    12. XM_041006476.1 → XP_040862410.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    13. XM_041006466.1 → XP_040862400.1  bZIP transcription factor isoform X1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    14. XM_041006475.1 → XP_040862409.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    15. XM_041006473.1 → XP_040862407.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    16. XM_006590312.3 → XP_006590375.1  bZIP transcription factor isoform X1

      See identical proteins and their annotated locations for XP_006590375.1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    17. XM_041006472.1 → XP_040862406.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    18. XM_041006470.1 → XP_040862404.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    19. XM_006590313.3 → XP_006590376.1  bZIP transcription factor isoform X1

      See identical proteins and their annotated locations for XP_006590376.1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    20. XM_041006469.1 → XP_040862403.1  bZIP transcription factor isoform X2

      UniProtKB/TrEMBL
      A0A0R0HL80, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:164 → 238
      DOG1; Seed dormancy control

    21. XM_041006464.1 → XP_040862398.1  bZIP transcription factor isoform X1

      UniProtKB/TrEMBL
      K7LRT7, Q39897
      Conserved Domains (2) summary
      cd14708
      Location:78 → 130
      bZIP_HBP1b-like; Basic leucine zipper (bZIP) domain of uncharaterized BZIP transcription factors with similarity to Triticum aestivum HBP-1b: a DNA-binding and dimerization domain
      pfam14144
      Location:166 → 240
      DOG1; Seed dormancy control

    22. XM_041006477.1 → XP_040862411.1  bZIP transcription factor isoform X3

      Conserved Domains (2) summary
      cd14686
      Location:3 → 54
      bZIP; coiled coil [structural motif]
      cl21462
      Location:2 → 54
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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