U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    MYB48 MYB transcription factor MYB48 [ Glycine max (soybean) ]

    Gene ID: 778031, updated on 18-Aug-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    MYB48
    Gene description
    MYB transcription factor MYB48
    Locus tag
    GLYMA_06G003800v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MYB48 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (340249..341250)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (347098..348099)

    Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase UPL3 Neighboring gene synaptotagmin-2 Neighboring gene actin-depolymerizing factor 5 Neighboring gene peptidyl-prolyl cis-trans isomerase CYP21-1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    MYB transcription factor MYB48

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001248708.2 → NP_001235637.1  MYB transcription factor MYB48

      See identical proteins and their annotated locations for NP_001235637.1

      Status: VALIDATED

      Source sequence(s)
      ACUP04001944, AK244447
      UniProtKB/TrEMBL
      A0A0R0JF18, Q0PJM0
      Conserved Domains (1) summary
      PLN03091
      Location:1 → 136
      PLN03091; hypothetical protein; Provisional

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      340249..341250
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases