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    LOC100780664 stress response protein NST1 [ Glycine max (soybean) ]

    Gene ID: 100780664, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100780664
    Gene description
    stress response protein NST1
    Locus tag
    GLYMA_13G236800v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100780664 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (34120291..34134635)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (34715104..34729441)

    Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor 12 Neighboring gene receptor-like protein 4 Neighboring gene uncharacterized LOC121173327 Neighboring gene dormancy-associated protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stress response protein NST1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      34120291..34134635
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006594514.4 → XP_006594577.1  stress response protein NST1

      UniProtKB/TrEMBL
      K7M1I2
      Conserved Domains (1) summary
      pfam18345
      Location:436 → 454
      zf_CCCH_4; Zinc finger domain

    RNA

    1. XR_417681.4 RNA Sequence

    2. XR_005887949.1 RNA Sequence

    3. XR_005887950.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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