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    LOC100526878 WRKY transcription factor [ Glycine max (soybean) ]

    Gene ID: 100526878, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100526878
    Gene description
    WRKY transcription factor
    Locus tag
    GLYMA_09G244000v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (47049309..47056678, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (46664237..46671524, complement)

    Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease Glyma18g48580 Neighboring gene ELMO domain-containing protein A Neighboring gene transcription termination factor MTEF1, chloroplastic-like Neighboring gene uncharacterized LOC100500533

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100526878

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001248479.2 → NP_001235408.1  uncharacterized protein LOC100526878

      See identical proteins and their annotated locations for NP_001235408.1

      Status: VALIDATED

      Source sequence(s)
      ACUP04003386, CO985107, EV273591
      UniProtKB/TrEMBL
      C6T2M1
      Conserved Domains (1) summary
      smart00774
      Location:154 → 211
      WRKY; DNA binding domain

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      47049309..47056678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041004780.1 → XP_040860714.1  uncharacterized protein LOC100526878 isoform X2

      UniProtKB/TrEMBL
      C6T2M1
      Conserved Domains (1) summary
      smart00774
      Location:154 → 211
      WRKY; DNA binding domain

    2. XM_014779556.3 → XP_014635042.1  uncharacterized protein LOC100526878 isoform X1

      UniProtKB/TrEMBL
      K7LFU7
      Conserved Domains (1) summary
      smart00774
      Location:154 → 221
      WRKY; DNA binding domain

    3. XM_041004779.1 → XP_040860713.1  uncharacterized protein LOC100526878 isoform X1

      UniProtKB/TrEMBL
      K7LFU7
      Conserved Domains (1) summary
      smart00774
      Location:154 → 221
      WRKY; DNA binding domain

    4. XM_014779555.3 → XP_014635041.1  uncharacterized protein LOC100526878 isoform X1

      UniProtKB/TrEMBL
      K7LFU7
      Conserved Domains (1) summary
      smart00774
      Location:154 → 221
      WRKY; DNA binding domain
    Nucleotide Protein
    Heading Accession and Version

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