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    BZIP101 putative bZIP domain class transcription factor [ Glycine max (soybean) ]

    Gene ID: 100101882, updated on 7-Dec-2023

    Summary

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    Gene symbol
    BZIP101
    Gene description
    putative bZIP domain class transcription factor
    Locus tag
    GLYMA_01G013600v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See BZIP101 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 1 NC_016088.4 (1304600..1314836, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 1 NC_016088.3 (1302168..1312458, complement)

    Chromosome 1 - NC_016088.4Genomic Context describing neighboring genes Neighboring gene ankyrin repeat-containing protein NPR4-like Neighboring gene cysteine-rich receptor-like protein kinase Neighboring gene uncharacterized LOC100813361 Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 30

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Liao Y, et al. Planta, 2008 Jul. PMID 18365246
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bZIP transcription factor 16
    Names
    transcription factor HBP-1a
    transcription factor bZIP101

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016088.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      1304600..1314836 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006572891.4 → XP_006572954.1  bZIP transcription factor 16 isoform X1

      UniProtKB/TrEMBL
      A0A0R0LBM0, I1J4P9
      Conserved Domains (5) summary
      smart00338
      Location:310 → 374
      BRLZ; basic region leucin zipper
      cd14702
      Location:315 → 365
      bZIP_plant_GBF1; coiled coil [structural motif]
      pfam05103
      Location:355 → 410
      DivIVA; DivIVA protein
      pfam07777
      Location:1 → 99
      MFMR; G-box binding protein MFMR
      pfam16596
      Location:138 → 277
      MFMR_assoc; Disordered region downstream of MFMR

    2. XM_014766194.3 → XP_014621680.1  bZIP transcription factor 16 isoform X3

      UniProtKB/TrEMBL
      A0A0R0LAB9
      Conserved Domains (4) summary
      smart00338
      Location:259 → 323
      BRLZ; basic region leucin zipper
      cd14702
      Location:264 → 314
      bZIP_plant_GBF1; coiled coil [structural motif]
      pfam07777
      Location:1 → 69
      MFMR; G-box binding protein MFMR
      pfam16596
      Location:73 → 226
      MFMR_assoc; Disordered region downstream of MFMR

    3. XM_003516900.5 → XP_003516948.1  bZIP transcription factor 16 isoform X2

      UniProtKB/TrEMBL
      I1J4P8, I1J4P9
      Conserved Domains (5) summary
      smart00338
      Location:309 → 373
      BRLZ; basic region leucin zipper
      cd14702
      Location:314 → 364
      bZIP_plant_GBF1; coiled coil [structural motif]
      pfam05103
      Location:354 → 409
      DivIVA; DivIVA protein
      pfam07777
      Location:1 → 98
      MFMR; G-box binding protein MFMR
      pfam16596
      Location:137 → 276
      MFMR_assoc; Disordered region downstream of MFMR
    Nucleotide Protein
    Heading Accession and Version

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