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    LOC100797466 protein REVEILLE 8 [ Glycine max (soybean) ]

    Gene ID: 100797466, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100797466
    Gene description
    protein REVEILLE 8
    Locus tag
    GLYMA_13G136300v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100797466 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (23981638..23988536)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (24891042..24897712)

    Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 6 subunit A Neighboring gene zinc finger CCCH domain-containing protein 11-like Neighboring gene uncharacterized LOC100779234 Neighboring gene 60S ribosomal protein L4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein REVEILLE 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      23981638..23988536
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003541352.5 → XP_003541400.1  protein REVEILLE 8 isoform X2

      See identical proteins and their annotated locations for XP_003541400.1

      UniProtKB/TrEMBL
      I1LZ00, Q0PJJ0
      Conserved Domains (1) summary
      TIGR01557
      Location:33 → 83
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

    2. XM_014765502.3 → XP_014620988.1  protein REVEILLE 8 isoform X1

      UniProtKB/TrEMBL
      A0A0R0GUJ1, Q0PJJ0
      Conserved Domains (2) summary
      TIGR01557
      Location:33 → 83
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
      smart00717
      Location:35 → 80
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

    3. XM_041008081.1 → XP_040864015.1  protein REVEILLE 8 isoform X3

      UniProtKB/TrEMBL
      I1LZ02, Q0PJJ0
      Conserved Domains (1) summary
      TIGR01557
      Location:33 → 83
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

    4. XM_041008080.1 → XP_040864014.1  protein REVEILLE 8 isoform X2

      UniProtKB/TrEMBL
      I1LZ00, Q0PJJ0
      Conserved Domains (1) summary
      TIGR01557
      Location:33 → 83
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

    5. XM_006594043.4 → XP_006594106.1  protein REVEILLE 8 isoform X3

      See identical proteins and their annotated locations for XP_006594106.1

      UniProtKB/TrEMBL
      I1LZ02, Q0PJJ0
      Conserved Domains (1) summary
      TIGR01557
      Location:33 → 83
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

    6. XM_006594045.4 → XP_006594108.1  protein REVEILLE 8 isoform X4

      UniProtKB/TrEMBL
      I1LZ01, Q0PJJ0
      Conserved Domains (1) summary
      TIGR01557
      Location:33 → 83
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    Nucleotide Protein
    Heading Accession and Version

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