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    Gm5971 predicted gene 5971 [ Mus musculus (house mouse) ]

    Gene ID: 546719, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm5971provided by MGI
    Official Full Name
    predicted gene 5971provided by MGI
    Primary source
    MGI:MGI:3646764
    See related
    Ensembl:ENSMUSG00000117908 AllianceGenome:MGI:3646764
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG546719
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    Genomic context

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    See Gm5971 in Genome Data Viewer
    Location:
    18 E4; 18 58.63 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (86944075..86945074, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (86925950..86926949, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46615 Neighboring gene DNA methyltransferase 1-associated protein 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_45286 Neighboring gene STARR-seq mESC enhancer starr_45287 Neighboring gene STARR-seq mESC enhancer starr_45288 Neighboring gene STARR-seq mESC enhancer starr_45289 Neighboring gene chaperonin containing Tcp1, subunit 7 (eta) pseudogene Neighboring gene STARR-seq mESC enhancer starr_45290 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene 18_1039.1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • SNW domain containing 1 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021125.3 

      Range
      101..1100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      86944075..86945074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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