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    Gm5648 predicted pseudogene 5648 [ Mus musculus (house mouse) ]

    Gene ID: 434907, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Gm5648provided by MGI
    Official Full Name
    predicted pseudogene 5648provided by MGI
    Primary source
    MGI:MGI:3647868
    See related
    Ensembl:ENSMUSG00000083668 AllianceGenome:MGI:3647868
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG434907
    Summary
    Is expressed in several structures, including alimentary system; brain ventricular layer; hindlimb phalanx; sensory organ; and urinary system. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Gm5648 in Genome Data Viewer
    Location:
    X E3; X 49.58 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (120244688..120246271, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (121334991..121336574, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 22590 Neighboring gene STARR-seq mESC enhancer starr_47861 Neighboring gene glycerol-3-phosphate dehydrogenase 1-like pseudogene Neighboring gene STARR-seq mESC enhancer starr_47862 Neighboring gene STARR-seq mESC enhancer starr_47863 Neighboring gene STARR-seq mESC enhancer starr_47864 Neighboring gene ubiquitin-conjugating enzyme E2W (putative) pseudogene Neighboring gene STARR-seq mESC enhancer starr_47865 Neighboring gene STARR-seq mESC enhancer starr_47866 Neighboring gene STARR-seq mESC enhancer starr_47867 Neighboring gene predicted gene, 23277

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • ubiquitin-like, containing PHD and RING finger domains, 1 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_017954.1 

      Range
      101..1684
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      120244688..120246271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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