U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Gm42340 predicted gene, 42340 [ Mus musculus (house mouse) ]

    Gene ID: 105247201, updated on 22-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Gm42340provided by MGI
    Official Full Name
    predicted gene, 42340provided by MGI
    Primary source
    MGI:MGI:5625225
    See related
    Ensembl:ENSMUSG00000130212 AllianceGenome:MGI:5625225
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Gm42340 in Genome Data Viewer
    Location:
    4 E1; 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (142368431..142388443)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (142641861..142661873)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene kazrin, periplakin interacting protein Neighboring gene predicted gene, 35752 Neighboring gene STARR-seq mESC enhancer starr_11958 Neighboring gene predicted gene, 42342 Neighboring gene predicted gene, 42341 Neighboring gene STARR-seq mESC enhancer starr_11959 Neighboring gene STARR-seq mESC enhancer starr_11960 Neighboring gene STARR-positive B cell enhancer ABC_E2723 Neighboring gene microRNA 7021 Neighboring gene PR domain containing 2, with ZNF domain Neighboring gene ribosomal protein L7A pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      142368431..142388443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003955301.1 RNA Sequence

      Related
      ENSMUST00000298538.1

    2. XR_003955302.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Research Materials