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    Gm39961 predicted gene, 39961 [ Mus musculus (house mouse) ]

    Gene ID: 105244330, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm39961provided by MGI
    Official Full Name
    predicted gene, 39961provided by MGI
    Primary source
    MGI:MGI:5622846
    See related
    AllianceGenome:MGI:5622846
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in testis adult (RPKM 1.2) and CNS E14 (RPKM 0.1) See more
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    Genomic context

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    See Gm39961 in Genome Data Viewer
    Location:
    2 H1; 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (153125772..153133249, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (153283852..153291426, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene pleiomorphic adenoma gene-like 2 Neighboring gene protein O-fucosyltransferase 1 Neighboring gene STARR-positive B cell enhancer ABC_E7868 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:153088886-153089039 Neighboring gene STARR-positive B cell enhancer ABC_E6002 Neighboring gene kinesin family member 3B Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:153161910-153162194 Neighboring gene RIKEN cDNA 2500004C02 gene Neighboring gene STARR-positive B cell enhancer ABC_E7869 Neighboring gene STARR-seq mESC enhancer starr_06089 Neighboring gene STARR-positive B cell enhancer ABC_E7870 Neighboring gene ASXL transcriptional regulator 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      153125772..153133249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_866869.3 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials