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    Gm39940 predicted gene, 39940 [ Mus musculus (house mouse) ]

    Gene ID: 105244305, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm39940provided by MGI
    Official Full Name
    predicted gene, 39940provided by MGI
    Primary source
    MGI:MGI:5622825
    See related
    AllianceGenome:MGI:5622825
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm39940 in Genome Data Viewer
    Location:
    2 F2; 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (133585088..133631927)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (133743168..133790007)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_05763 Neighboring gene microRNA 3090 Neighboring gene STARR-seq mESC enhancer starr_05764 Neighboring gene predicted gene, 25258 Neighboring gene Bmp2 homolog-enhancer region Neighboring gene Bmp2 downstream enhancer ECR-1 Neighboring gene STARR-seq mESC enhancer starr_05765 Neighboring gene STARR-seq mESC enhancer starr_05766 Neighboring gene STARR-seq mESC enhancer starr_05767 Neighboring gene predicted gene, 54132 Neighboring gene STARR-seq mESC enhancer starr_05768 Neighboring gene STARR-seq mESC enhancer starr_05769 Neighboring gene predicted gene, 52526 Neighboring gene hydroxyacid oxidase 1, liver

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      133585088..133631927
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_866760.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials