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    Gm39880 predicted gene, 39880 [ Mus musculus (house mouse) ]

    Gene ID: 105244236, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm39880provided by MGI
    Official Full Name
    predicted gene, 39880provided by MGI
    Primary source
    MGI:MGI:5622765
    See related
    AllianceGenome:MGI:5622765
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm39880 in Genome Data Viewer
    Location:
    2 E1; 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (92609767..92679177)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (92779422..92848832)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 1 Neighboring gene STARR-seq mESC enhancer starr_05147 Neighboring gene STARR-seq mESC enhancer starr_05149 Neighboring gene STARR-seq mESC enhancer starr_05150 Neighboring gene predicted gene 13816 Neighboring gene predicted gene, 32413 Neighboring gene predicted gene 13791 Neighboring gene STARR-seq mESC enhancer starr_05153 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:92786015-92786280 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:92786303-92786486 Neighboring gene synaptotagmin XIII Neighboring gene PR domain containing 11 Neighboring gene RIKEN cDNA 4631405J19 gene Neighboring gene predicted gene, 54114

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      92609767..92679177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_866558.3 RNA Sequence

    2. XR_866556.2 RNA Sequence

    3. XR_866557.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials