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    Gm39468 predicted gene, 39468 [ Mus musculus (house mouse) ]

    Gene ID: 105243583, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm39468provided by MGI
    Official Full Name
    predicted gene, 39468provided by MGI
    Primary source
    MGI:MGI:5622353
    See related
    Ensembl:ENSMUSG00000121049 AllianceGenome:MGI:5622353
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in testis adult (RPKM 7.1), CNS E11.5 (RPKM 1.0) and 5 other tissues See more
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    Genomic context

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    See Gm39468 in Genome Data Viewer
    Location:
    11 E2; 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (113677000..113678521)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (113786174..113787695)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CDC42 effector protein 4 Neighboring gene STARR-positive B cell enhancer ABC_E8469 Neighboring gene STARR-seq mESC enhancer starr_31107 Neighboring gene predicted gene 11736 Neighboring gene VISTA enhancer mm1462 Neighboring gene sidekick cell adhesion molecule 2 Neighboring gene predicted gene, 51930 Neighboring gene predicted gene, 51929

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_168674.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL603706
      Related
      ENSMUST00000246991.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      113677000..113678521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Research Materials