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    Gm29601 predicted gene 29601 [ Mus musculus (house mouse) ]

    Gene ID: 105246667, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm29601provided by MGI
    Official Full Name
    predicted gene 29601provided by MGI
    Primary source
    MGI:MGI:5580307
    See related
    AllianceGenome:MGI:5580307
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 3.2) See more
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    Genomic context

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    See Gm29601 in Genome Data Viewer
    Location:
    1 D; 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (96470411..96484450, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 22360 Neighboring gene STARR-seq mESC enhancer starr_01761 Neighboring gene RIKEN cDNA 1700063A18 gene Neighboring gene STARR-seq mESC enhancer starr_01764 Neighboring gene STARR-seq mESC enhancer starr_01765 Neighboring gene STARR-seq mESC enhancer starr_01766 Neighboring gene RIKEN cDNA 4930533P14 gene Neighboring gene predicted gene, 30490 Neighboring gene STARR-seq mESC enhancer starr_01767 Neighboring gene STARR-seq mESC enhancer starr_01768 Neighboring gene predicted gene, 26245 Neighboring gene abhydrolase domain containing 6 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000067.7 Chromosome 1 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_188977.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC124172

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      96470411..96484450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials