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    ninaE neither inactivation nor afterpotential E [ Drosophila sechellia ]

    Gene ID: 6619026, updated on 16-May-2024

    Summary

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    Gene symbol
    ninaE
    Gene description
    neither inactivation nor afterpotential E
    Locus tag
    Dsec_GM26888
    See related
    EnsemblRapid:LOC6619026
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM26888; GM26888-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See ninaE in Genome Data Viewer
    Location:
    chromosome: 3R
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (8735388..8737348)

    Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene Caseinolytic protease chaperone subunit Neighboring gene uncharacterized LOC6619025 Neighboring gene apoptotic signal-regulating kinase 1 Neighboring gene Activator-recruited cofactor subunit 42

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045952.1 Chromosome 3R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phototransduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    opsin Rh1
    Names
    Dsec\GM26888
    Dsec\GM26888-PA
    dsec_GLEANR_9966

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045952.1 Reference ASM438219v1

      Range
      8735388..8737348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002043235.2 → XP_002043271.1  opsin Rh1

      See identical proteins and their annotated locations for XP_002043271.1

      UniProtKB/TrEMBL
      B4IHR1
      Related
      XP_002043271.1, XM_002043235.2
      Conserved Domains (2) summary
      pfam00001
      Location:67 → 329
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:58 → 230
      7tm_4; Olfactory receptor
    Nucleotide Protein Strain
    Heading Accession and Version

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