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    pont RuvB-like helicase pontin [ Drosophila sechellia ]

    Gene ID: 6606968, updated on 16-Oct-2024

    Summary

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    Gene symbol
    pont
    Gene description
    RuvB-like helicase pontin
    Locus tag
    Dsec_GM23872
    See related
    EnsemblRapid:LOC6606968
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM23872; GM23872-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See pont in Genome Data Viewer
    Location:
    chromosome: 3R
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (18211874..18213786, complement)

    Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 23 member 1 Neighboring gene Nuak family kinase 1 Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene NAD-dependent protein deacetylase Sirt6 Neighboring gene glycine dehydrogenase (decarboxylating), mitochondrial Neighboring gene microtubule-associated protein futsch

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045952.1 Chromosome 3R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in box C/D snoRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of NuA4 histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of R2TP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of Swr1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ruvB-like helicase 1
    Names
    Dsec\GM23872
    Dsec\GM23872-PA
    dsec_GLEANR_6897

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045952.1 Reference ASM438219v1

      Range
      18211874..18213786 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002031724.2 → XP_002031760.1  ruvB-like helicase 1

      See identical proteins and their annotated locations for XP_002031760.1

      UniProtKB/TrEMBL
      B4HJ74
      Related
      XP_002031760.1, XM_002031724.2
      Conserved Domains (1) summary
      COG1224
      Location:2 → 455
      TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials