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    Srp72 signal recognition particle 72 [ Drosophila sechellia ]

    Gene ID: 6619246, updated on 23-May-2024

    Summary

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    Gene symbol
    Srp72
    Gene description
    signal recognition particle 72
    Locus tag
    Dsec_GM23121
    See related
    EnsemblRapid:LOC6619246
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM23121; GM23121-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See Srp72 in Genome Data Viewer
    Location:
    chromosome: 3R
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (8025127..8027436, complement)

    Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene meckelin Neighboring gene transcription intermediary factor 1-alpha Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene Pseudouridine synthase 1 Neighboring gene septin-2 Neighboring gene uncharacterized LOC6619248

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045952.1 Chromosome 3R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 7S RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of signal recognition particle, endoplasmic reticulum targeting IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    signal recognition particle subunit SRP72
    Names
    Dsec\GM23121
    Dsec\GM23121-PA
    dsec_GLEANR_5962

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045952.1 Reference ASM438219v1

      Range
      8025127..8027436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002043428.2 → XP_002043464.1  signal recognition particle subunit SRP72

      See identical proteins and their annotated locations for XP_002043464.1

      UniProtKB/TrEMBL
      B4IIA4
      Related
      XP_002043464.1, XM_002043428.2
      Conserved Domains (4) summary
      sd00006
      Location:45 → 71
      TPR; TPR repeat [structural motif]
      pfam08492
      Location:534 → 583
      SRP72; SRP72 RNA-binding domain
      pfam12895
      Location:24 → 101
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
      pfam17004
      Location:52 → 155
      SRP_TPR_like; Putative TPR-like repeat
    Nucleotide Protein Strain
    Heading Accession and Version

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