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    qkr54B quaking related 54B [ Drosophila sechellia ]

    Gene ID: 6609602, updated on 23-May-2024

    Summary

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    Gene symbol
    qkr54B
    Gene description
    quaking related 54B
    Locus tag
    Dsec_GM21780
    See related
    EnsemblRapid:LOC6609602
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM21780; GM21780-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See qkr54B in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (13582368..13587307)

    Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene dendritic arbor reduction protein 1 Neighboring gene uncharacterized LOC6609601 Neighboring gene probable serine/threonine-protein kinase fhkB Neighboring gene protein 5NUC Neighboring gene transmembrane protease serine 9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045950.1 Chromosome 2R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: probable serine/threonine-protein kinase clkA
    Names
    Dsec\GM21780
    Dsec\GM21780-PA
    dsec_GLEANR_4532
    probable serine/threonine-protein kinase clkA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045950.1 Reference ASM438219v1

      Range
      13582368..13587307
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032717155.1 → XP_032573046.1  LOW QUALITY PROTEIN: probable serine/threonine-protein kinase clkA

      UniProtKB/TrEMBL
      B4HMU2
      Related
      XP_032573046.1, XM_032717155.1
      Conserved Domains (2) summary
      pfam16274
      Location:68 → 118
      Qua1; Qua1 domain
      cd22384
      Location:117 → 218
      KH-I_KHDRBS; type I K homology (KH) RNA-binding domain found in the KH domain-containing, RNA-binding, signal transduction-associated protein (KHDRBS) family
    Nucleotide Protein Strain
    Heading Accession and Version

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