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    LOC6609590 S-methyl-5'-thioadenosine phosphorylase [ Drosophila sechellia ]

    Gene ID: 6609590, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6609590
    Gene description
    S-methyl-5'-thioadenosine phosphorylase
    Locus tag
    Dsec_GM21772
    See related
    EnsemblRapid:LOC6609590
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM21772; GM21772-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6609590 in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (13511499..13512864)

    Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene connector enhancer of ksr Neighboring gene lethal (2) k01209 Neighboring gene threonylcarbamoyladenosine tRNA methylthiotransferase Neighboring gene Brahma associated protein 55kD Neighboring gene Lethal hybrid rescue Neighboring gene Egg-derived tyrosine phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045950.1 Chromosome 2R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-methyl-5-thioadenosine phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-methionine salvage from methylthioadenosine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleoside metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    S-methyl-5'-thioadenosine phosphorylase
    Names
    Dsec\GM21772
    Dsec\GM21772-PA
    dsec_GLEANR_4525

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045950.1 Reference ASM438219v1

      Range
      13511499..13512864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002034231.2 → XP_002034267.1  S-methyl-5'-thioadenosine phosphorylase

      See identical proteins and their annotated locations for XP_002034267.1

      UniProtKB/TrEMBL
      B4HML2
      Related
      XP_002034267.1, XM_002034231.2
      Conserved Domains (1) summary
      cd09010
      Location:18 → 261
      MTAP_SsMTAPII_like_MTIP; 5'-deoxy-5'-methylthioadenosine phosphorylases (MTAP) similar to Sulfolobus solfataricus MTAPII and Pseudomonas aeruginosa PAO1 5'-methylthioinosine phosphorylase (MTIP)
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials