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    RpL4 ribosomal protein L4 [ Drosophila sechellia ]

    Gene ID: 6618727, updated on 23-May-2024

    Summary

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    Gene symbol
    RpL4
    Gene description
    ribosomal protein L4
    Locus tag
    Dsec_GM16362
    See related
    EnsemblRapid:LOC6618727
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM16362; GM16362-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See RpL4 in Genome Data Viewer
    Location:
    chromosome: 3R
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (26392396..26394487)

    Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene protein FAM50 homolog Neighboring gene BCAS2 pre-mRNA processing factor Neighboring gene glycerol-3-phosphate acyltransferase mino Neighboring gene RING finger protein nenya Neighboring gene Nuclear receptor binding SET domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045952.1 Chromosome 3R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L4
    Names
    Dsec\GM16362
    Dsec\GM16362-PA
    dsec_GLEANR_17466

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045952.1 Reference ASM438219v1

      Range
      26392396..26394487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032723088.1 → XP_032578979.1  60S ribosomal protein L4

      UniProtKB/TrEMBL
      B4IGX6
      Related
      XP_032578979.1, XM_032723088.1
      Conserved Domains (1) summary
      PTZ00428
      Location:6 → 383
      PTZ00428; 60S ribosomal protein L4; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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