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    LOC6612383 RNA-binding protein 25 [ Drosophila sechellia ]

    Gene ID: 6612383, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6612383
    Gene description
    RNA-binding protein 25
    Locus tag
    Dsec_GM12423
    See related
    EnsemblRapid:LOC6612383
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM12423; GM12423-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6612383 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) X NC_045954.1 (5411045..5415497)

    Chromosome X - NC_045954.1Genomic Context describing neighboring genes Neighboring gene proton channel OtopLc Neighboring gene NAD-dependent protein deacylase Sirt4 Neighboring gene RAS oncogene family member Rab18 Neighboring gene Ribosomal protein L35 Neighboring gene Trapped in endoderm 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045954.1 Chromosome X Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 25
    Names
    Dsec\GM12423
    Dsec\GM12423-PA
    dsec_GLEANR_12833

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045954.1 Reference ASM438219v1

      Range
      5411045..5415497
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002036856.2 → XP_002036892.1  RNA-binding protein 25 isoform X1

      See identical proteins and their annotated locations for XP_002036892.1

      UniProtKB/TrEMBL
      B4I0M0
      Related
      XP_002036892.1, XM_002036856.2
      Conserved Domains (2) summary
      smart00311
      Location:915 → 986
      PWI; domain in splicing factors
      cd12446
      Location:62 → 136
      RRM_RBM25; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein 25 and similar proteins

    2. XM_032724094.1 → XP_032579985.1  RNA-binding protein 25 isoform X1

      UniProtKB/TrEMBL
      B4I0M0
      Related
      XP_032579985.1, XM_032724094.1
      Conserved Domains (2) summary
      smart00311
      Location:915 → 986
      PWI; domain in splicing factors
      cd12446
      Location:62 → 136
      RRM_RBM25; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein 25 and similar proteins

    3. XM_032724096.1 → XP_032579987.1  RNA-binding protein 25 isoform X2

      Related
      XP_032579987.1, XM_032724096.1
      Conserved Domains (1) summary
      cd12446
      Location:62 → 136
      RRM_RBM25; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein 25 and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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