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Gm11713 predicted gene 11713 [ Mus musculus (house mouse) ]

Gene ID: 102640313, updated on 17-Aug-2024

Summary

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Official Symbol
Gm11713provided by MGI
Official Full Name
predicted gene 11713provided by MGI
Primary source
MGI:MGI:3652139
See related
AllianceGenome:MGI:3652139
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm11713 in Genome Data Viewer
Location:
11 E1; 11 70.29 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (107301216..107304562)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (107410390..107413736)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_30965 Neighboring gene predicted gene, 39425 Neighboring gene actin, gamma, cytoplasmic 1 pseudogene Neighboring gene phosphatidylinositol transfer protein, cytoplasmic 1 Neighboring gene STARR-positive B cell enhancer ABC_E7084 Neighboring gene STARR-seq mESC enhancer starr_30969 Neighboring gene STARR-positive B cell enhancer mm9_chr11:107194258-107194558 Neighboring gene STARR-seq mESC enhancer starr_30972 Neighboring gene predicted gene 11716 Neighboring gene STARR-seq mESC enhancer starr_30979 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:107278463-107278572 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:107278655-107278916 Neighboring gene STARR-seq mESC enhancer starr_30982 Neighboring gene STARR-seq mESC enhancer starr_30985 Neighboring gene predicted gene 11714 Neighboring gene STARR-positive B cell enhancer ABC_E4008 Neighboring gene STARR-positive B cell enhancer ABC_E3032 Neighboring gene STARR-positive B cell enhancer mm9_chr11:107340564-107340865 Neighboring gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    107301216..107304562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_389089.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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