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    DMBT1L1 deleted in malignant brain tumors 1 like 1 (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 375940, updated on 17-Sep-2024

    Summary

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    Official Symbol
    DMBT1L1provided by HGNC
    Official Full Name
    deleted in malignant brain tumors 1 like 1 (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:49497
    See related
    Ensembl:ENSG00000293538 AllianceGenome:HGNC:49497
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DMBT1P1
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    all
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    Genomic context

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    See DMBT1L1 in Genome Data Viewer
    Location:
    10q26.13
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (122756694..122797645)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (123631736..123672699)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (124516210..124557161)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene spermadhesin family member Neighboring gene chromosome 10 open reading frame 120 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124527221-124527722 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124527723-124528222 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124539143-124539651 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:124556394-124557593 Neighboring gene deleted in malignant brain tumors 1 protein-like Neighboring gene FAM24B-CUZD1 readthrough Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:124605161-124605662 Neighboring gene CUB and zona pellucida like domains 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. The DNA sequence and comparative analysis of human chromosome 10. Deloukas P, et al. Nature, 2004 May 27. PMID 15164054

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Markers

    Homology

    Other Names

    • ZP domain-containing protein LOC729800-like
    • deleted in malignant brain tumors 1 pseudogene 1
    • putative ZP domain-containing protein LOC729800

    Clone Names

    • FLJ46361

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003570.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK128228, AL731543
      Related
      ENST00000439464.6

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      122756694..122797645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      123631736..123672699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_005514.1: Suppressed sequence

      Description
      NG_005514.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.

    2. NG_025545.1: Suppressed sequence

      Description
      NG_025545.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.

    3. NM_198577.1: Suppressed sequence

      Description
      NM_198577.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials