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    Uncharacterized conserved protein UCP015417, vWA [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822076, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Uncharacterized conserved protein UCP015417, vWA
    Primary source
    TAIR:AT3G24780
    Locus tag
    AT3G24780
    See related
    Araport:AT3G24780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (9049090..9051752)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene proteolysis 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_113390.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized conserved protein UCP015417, vWA
    NP_189122.1
    • Uncharacterised conserved protein UCP015417, vWA; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP015417, vWA (InterPro:IPR011205), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP015417, vWA (TAIR:AT5G13210.1); Has 427 Blast hits to 371 proteins in 80 species: Archae - 0; Bacteria - 73; Metazoa - 3; Fungi - 48; Plants - 116; Viruses - 18; Other Eukaryotes - 169 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9049090..9051752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113390.2 → NP_189122.1  Uncharacterized conserved protein UCP015417, vWA [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189122.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAM9, Q1PEM2
      Conserved Domains (1) summary
      pfam11443
      Location:113 → 703
      DUF2828; Domain of unknown function (DUF2828)
    Nucleotide Protein
    Heading Accession and Version

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