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    RNA-directed DNA polymerase (reverse transcriptase)-related family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814782, updated on 18-Sep-2024

    Summary

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    Official Full Name
    RNA-directed DNA polymerase (reverse transcriptase)-related family protein
    Primary source
    TAIR:AT2G02520
    Locus tag
    AT2G02520
    See related
    Araport:AT2G02520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8K22.18; T8K22_18
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (676771..678145, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene NADH dehydrogenase (ubiquinone)s Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene homeobox protein 21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_126308.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RNA-directed DNA polymerase (reverse transcriptase)-related family protein
    NP_178356.1
    • RNA-directed DNA polymerase (reverse transcriptase)-related family protein; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT1G43730.1); Has 502 Blast hits to 500 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 500; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      676771..678145 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126308.1 → NP_178356.1  RNA-directed DNA polymerase (reverse transcriptase)-related family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178356.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O64724
      Conserved Domains (1) summary
      pfam13966
      Location:27 → 109
      zf-RVT; zinc-binding in reverse transcriptase
    Nucleotide Protein
    Heading Accession and Version

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