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    SRS2 P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828615, updated on 18-Sep-2024

    Summary

    Official Symbol
    SRS2
    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT4G25120
    Locus tag
    AT4G25120
    See related
    Araport:AT4G25120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2; ATSRS2; F24A6.8; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2
    Summary
    Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3#Aeo- to 5#Aeo-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.
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    Genomic context

    See SRS2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    29
    Sequence:
    Chromosome: 4; NC_003075.7 (12890545..12898501)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Fe superoxide dismutase 1 Neighboring gene metacaspase 2 Neighboring gene peptide met sulfoxide reductase 4 Neighboring gene oleosin 1 Neighboring gene HAD superfamily, subfamily IIIB acid phosphatase

    General gene information

    NM_001341722.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA helicase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_001320059.1
    • SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12890545..12898501
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341722.1NP_001320059.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D1KF50, F4JSH5, Q9SW14
      UniProtKB/TrEMBL
      A0A5S9XXU5, A0A654FSK4