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    zinc finger FYVE domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817114, updated on 18-Sep-2024

    Summary

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    Official Full Name
    zinc finger FYVE domain protein
    Primary source
    TAIR:AT2G25730
    Locus tag
    AT2G25730
    See related
    Araport:AT2G25730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3N11.1; F3N11_1
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    36
    Sequence:
    Chromosome: 2; NC_003071.7 (10956263..10972951, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene holocarboxylase synthase 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Sulfite exporter TauE/SafE family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    2. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001202673.2
    NM_001336017.1
    NM_001336018.1
    NM_128132.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger FYVE domain protein
    NP_001189602.1
    • unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages.
    NP_565607.1
    • unknown protein; Has 157 Blast hits to 144 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10956263..10972951 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202673.2 → NP_001189602.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189602.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYK1, A0A5S9X165, F4ISN0

    2. NM_001336017.1 → NP_001324903.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYK1, A0A5S9X165, F4ISN0

    3. NM_128132.1 → NP_565607.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565607.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYK1, A0A5S9X165, Q9SL90

    4. NM_001336018.1 → NP_001324902.1  zinc finger FYVE domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYK1, A0A1P8B1I9, A0A5S9X165, A0A654EW49
    Nucleotide Protein
    Heading Accession and Version

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