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    SLK3 SEUSS-like 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828656, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SLK3
    Official Full Name
    SEUSS-like 3
    Primary source
    TAIR:AT4G25515
    Locus tag
    AT4G25515
    See related
    Araport:AT4G25515
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SEUSS-like 3
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    Genomic context

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    See SLK3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (13028219..13031803)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene arginine/serine-rich splicing factor 35 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene SEUSS-like 1 Neighboring gene FLOWERING WAGENINGEN Neighboring gene homolog of DNA mismatch repair protein MSH3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_148375.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SEUSS-like 3
    NP_680741.5
    • SEUSS-like 3 (SLK3); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 4377 Blast hits to 3114 proteins in 231 species: Archae - 0; Bacteria - 84; Metazoa - 736; Fungi - 339; Plants - 190; Viruses - 30; Other Eukaryotes - 2998 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13028219..13031803
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_148375.6 → NP_680741.5  SEUSS-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_680741.5

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JT98
      UniProtKB/TrEMBL
      A0A178USY9
      Conserved Domains (1) summary
      pfam01803
      Location:164 → 424
      LIM_bind; LIM-domain binding protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JT98.1

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases
    Research Materials