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    DIN2 Glycosyl hydrolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825184, updated on 15-Oct-2023

    Summary

    Gene symbol
    DIN2
    Gene description
    Glycosyl hydrolase superfamily protein
    Primary source
    Araport:AT3G60140
    Locus tag
    AT3G60140
    See related
    TAIR:AT3G60140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    BETA GLUCOSIDASE 30; BGLU30; DARK INDUCIBLE 2; SENESCENCE-RELATED GENE 2; SRG2
    Summary
    Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.
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    Genomic context

    See DIN2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (22216540..22220824)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene beta glucosidase 27 Neighboring gene beta glucosidase 16 Neighboring gene miscRNA Neighboring gene NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598) Neighboring gene multidrug resistance-associated protein 9

    General gene information

    NM_115877.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables beta-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
     
    enables scopolin beta-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    Glycosyl hydrolase superfamily protein
    NP_191573.1
    • DARK INDUCIBLE 2 (DIN2); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: aging, response to light stimulus, response to sucrose stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 28 (TAIR:AT2G44460.1); Has 11303 Blast hits to 10947 proteins in 1460 species: Archae - 142; Bacteria - 7771; Metazoa - 714; Fungi - 199; Plants - 1462; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22216540..22220824
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340024.1NP_001327679.1  Glycosyl hydrolase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LT24
    2. NM_115877.4NP_191573.1  Glycosyl hydrolase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191573.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q39225, Q39226, Q8L7I3, Q9ASR7, Q9FVM4, Q9M1C9
      UniProtKB/TrEMBL
      A0A5S9XN58, A0A654FJF6
      Conserved Domains (1) summary
      cl23725
      Location:30504
      Glyco_hydro; Glycosyl hydrolases