U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819760, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Pectinacetylesterase family protein
    Primary source
    TAIR:AT3G05910
    Locus tag
    AT3G05910
    See related
    Araport:AT3G05910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2O10.13
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (1764253..1767843, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Low temperature and salt responsive protein family Neighboring gene ncRNA Neighboring gene neurofilament protein-like protein Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene germin-like protein 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001202891.1
    NM_111465.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Pectinacetylesterase family protein
    NP_001189820.1
    • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G26670.1).
    NP_566263.1
    • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G26670.1); Has 545 Blast hits to 537 proteins in 93 species: Archae - 0; Bacteria - 42; Metazoa - 117; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1764253..1767843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111465.5 → NP_566263.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566263.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M9K8, Q9SFF6
      UniProtKB/TrEMBL
      A0A178V9K4, A0A5S9X9S7
      Conserved Domains (1) summary
      pfam03283
      Location:46 → 394
      PAE; Pectinacetylesterase

    2. NM_001202891.1 → NP_001189820.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189820.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4J9L0
      Conserved Domains (1) summary
      pfam03283
      Location:46 → 302
      PAE; Pectinacetylesterase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SFF6.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.