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    9330178D15Rik RIKEN cDNA 9330178D15 gene [ Mus musculus (house mouse) ]

    Gene ID: 329780, updated on 2-Nov-2024

    Summary

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    Official Symbol
    9330178D15Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 9330178D15 geneprovided by MGI
    Primary source
    MGI:MGI:4437729
    See related
    Ensembl:ENSMUSG00000104553 AllianceGenome:MGI:4437729
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    9330178D15
    Summary
    Is expressed in lung. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See 9330178D15Rik in Genome Data Viewer
    Location:
    3; 3 H4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (155681991..155714229)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (155976354..156008592)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_09359 Neighboring gene predicted gene, 33266 Neighboring gene STARR-seq mESC enhancer starr_09360 Neighboring gene STARR-seq mESC enhancer starr_09361 Neighboring gene predicted gene, 23038 Neighboring gene STARR-seq mESC enhancer starr_09362 Neighboring gene STARR-seq mESC enhancer starr_09363 Neighboring gene geminin pseudogene Neighboring gene STARR-seq mESC enhancer starr_09364 Neighboring gene predicted gene, 33311

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040553.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC140269, AK034327
      Related
      ENSMUST00000196033.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      155681991..155714229
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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