U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    FERP_RS06370 alpha-hydroxy acid oxidase [ Ferroglobus placidus DSM 10642 ]

    Gene ID: 8778795, updated on 22-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    FERP_RS06370
    Gene description
    alpha-hydroxy acid oxidase
    Locus tag
    FERP_RS06370
    Gene type
    protein coding
    Organism
    Ferroglobus placidus DSM 10642 (strain: DSM 10642, culture-collection: DSM:10642, type-material: type strain of Ferroglobus placidus)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus
    Old locus tag
    Ferp_1282
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_013849.1 (1104482..1105417, complement)

    NC_013849.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 30S ribosomal protein S17e Neighboring gene 4-hydroxy-tetrahydrodipicolinate synthase Neighboring gene (Fe-S)-binding protein Neighboring gene sugar phosphate isomerase/epimerase Neighboring gene hypothetical protein Neighboring gene MarR family transcriptional regulator

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_013849.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The TIM-barrel fold: a versatile framework for efficient enzymes. Wierenga RK. FEBS Lett, 2001 Mar 16. PMID 11257493
    2. Complete genome sequence of Ferroglobus placidus AEDII12DO. Anderson I, et al. Stand Genomic Sci, 2011 Oct 15. PMID 22180810, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    alpha-hydroxy acid oxidase
    WP_012965779.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013849.1 Reference assembly

      Range
      1104482..1105417 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012965779.1 alpha-hydroxy acid oxidase [Ferroglobus placidus]

      See identical proteins and their annotated locations for WP_012965779.1

      UniProtKB/TrEMBL
      D3RY73
      Conserved Domains (2) summary
      pfam01070
      Location:23 → 311
      FMN_dh; FMN-dependent dehydrogenase
      cl21457
      Location:23 → 307
      TIM_phosphate_binding; TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases