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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001098533.3 → NP_001092003.2 cyclin-dependent kinase 10 isoform c
See identical proteins and their annotated locations for NP_001092003.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (c) uses an alternate donor splice site at the first exon resulting in translation from a downstream start codon, and uses an alternate donor splice site in the 3' coding region, compared to variant a. The resulting isoform (c) has a shorter N-terminus and lacks a 6-aa segment near the C-terminus, compared to isoform a.
- Source sequence(s)
-
BC017342
- UniProtKB/TrEMBL
-
F8W872
- Conserved Domains (1) summary
-
- cl21453
Location:1 → 262
- PKc_like; Protein Kinases, catalytic domain
-
NM_001160367.2 → NP_001153839.1 cyclin-dependent kinase 10 isoform d
See identical proteins and their annotated locations for NP_001153839.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (d) uses an alternate donor splice site at the first exon resulting in translation from downstream start codon, compared to variant a. The resulting isoform (d) has a shorter N-terminus, compared to isoform a.
- Source sequence(s)
-
AC010538, AK298386, BC017342
- UniProtKB/TrEMBL
-
F8W872
- Conserved Domains (1) summary
-
- cd07845
Location:1 → 268
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
-
NM_052987.4 → NP_443713.2 cyclin-dependent kinase 10 isoform b
See identical proteins and their annotated locations for NP_443713.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (b) uses an alternate donor splice site at the first exon resulting in translation from a downstream start codon, and uses an alternate acceptor splice site at the last exon, compared to variant a. The resulting isoform (b) has a shorter N-terminus and a shorter and distinct C-terminus, compared to isoform a.
- Source sequence(s)
-
BC017342, L33264
- Consensus CDS
-
CCDS32514.2
- UniProtKB/TrEMBL
-
F8W872
- Related
- ENSP00000424415.1, ENST00000505473.5
- Conserved Domains (1) summary
-
- cl21453
Location:1 → 257
- PKc_like; Protein Kinases, catalytic domain
-
NM_052988.5 → NP_443714.3 cyclin-dependent kinase 10 isoform a
See identical proteins and their annotated locations for NP_443714.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (a) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AK298386, BC017342
- Consensus CDS
-
CCDS10984.2
- UniProtKB/Swiss-Prot
- A8K370, A8K8I6, A8MXU6, B3KQJ3, B7Z420, D3DX82, D3DX83, Q0VGZ7, Q15130, Q15131, Q6PJC0
- UniProtKB/TrEMBL
-
B7Z537
- Related
- ENSP00000338673.7, ENST00000353379.12
- Conserved Domains (1) summary
-
- cd07845
Location:31 → 339
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
RNA
-
NR_027702.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (e) lacks the second exon, compared to variant a. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant a, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK296631, AK298386, BC017342
- Related
-
ENST00000510811.6
-
NR_027703.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: Transcript Variant: This variant (f) lacks the second exon and uses an alternate acceptor splice site at the last exon, compared to variant a. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant a, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK298386, BC025301
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000016.10 Reference GRCh38.p14 Primary Assembly
- Range
-
89686689..89696354
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011523405.4 → XP_011521707.1 cyclin-dependent kinase 10 isoform X1
- UniProtKB/TrEMBL
-
B7Z537
- Conserved Domains (2) summary
-
- cd07845
Location:31 → 371
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
- PTZ00024
Location:43 → 368
- PTZ00024; cyclin-dependent protein kinase; Provisional
-
XM_011523407.4 → XP_011521709.1 cyclin-dependent kinase 10 isoform X3
- UniProtKB/TrEMBL
-
B7Z537
- Conserved Domains (2) summary
-
- cd07845
Location:31 → 360
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
- PTZ00024
Location:43 → 360
- PTZ00024; cyclin-dependent protein kinase; Provisional
-
XM_011523406.4 → XP_011521708.1 cyclin-dependent kinase 10 isoform X2
- UniProtKB/TrEMBL
-
B7Z537
- Conserved Domains (2) summary
-
- cd07845
Location:31 → 365
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
- PTZ00024
Location:43 → 362
- PTZ00024; cyclin-dependent protein kinase; Provisional
-
XM_011523408.4 → XP_011521710.1 cyclin-dependent kinase 10 isoform X4
- UniProtKB/TrEMBL
-
B7Z537
- Conserved Domains (2) summary
-
- cd07845
Location:31 → 354
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
- PTZ00024
Location:43 → 354
- PTZ00024; cyclin-dependent protein kinase; Provisional
-
XM_006721310.4 → XP_006721373.1 cyclin-dependent kinase 10 isoform X7
- UniProtKB/TrEMBL
-
B7Z537
- Related
-
ENST00000505733.5
- Conserved Domains (2) summary
-
- cd07845
Location:31 → 328
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
- PLN00009
Location:38 → 325
- PLN00009; cyclin-dependent kinase A; Provisional
-
XM_006721308.4 → XP_006721371.1 cyclin-dependent kinase 10 isoform X6
- UniProtKB/TrEMBL
-
B7Z537
- Conserved Domains (1) summary
-
- cd07845
Location:31 → 333
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
-
XM_017023807.3 → XP_016879296.1 cyclin-dependent kinase 10 isoform X9
- UniProtKB/TrEMBL
-
B7Z537
-
XM_011523415.3 → XP_011521717.1 cyclin-dependent kinase 10 isoform X11
See identical proteins and their annotated locations for XP_011521717.1
- UniProtKB/TrEMBL
-
F8W872
- Conserved Domains (1) summary
-
- cd07845
Location:1 → 300
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
-
XM_011523410.3 → XP_011521712.1 cyclin-dependent kinase 10 isoform X11
See identical proteins and their annotated locations for XP_011521712.1
- UniProtKB/TrEMBL
-
F8W872
- Conserved Domains (1) summary
-
- cd07845
Location:1 → 300
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
-
XM_017023806.2 → XP_016879295.1 cyclin-dependent kinase 10 isoform X5
- UniProtKB/TrEMBL
-
F8W872
- Conserved Domains (2) summary
-
- cd07845
Location:16 → 334
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
- PTZ00024
Location:16 → 331
- PTZ00024; cyclin-dependent protein kinase; Provisional
-
XM_047434820.1 → XP_047290776.1 cyclin-dependent kinase 10 isoform X8
-
XM_047434821.1 → XP_047290777.1 cyclin-dependent kinase 10 isoform X10
- Related
- ENSP00000329957.8, ENST00000331006.12
-
XM_047434825.1 → XP_047290781.1 cyclin-dependent kinase 10 isoform X13
-
XM_047434824.1 → XP_047290780.1 cyclin-dependent kinase 10 isoform X12
-
XM_011523417.4 → XP_011521719.1 cyclin-dependent kinase 10 isoform X15
- Conserved Domains (2) summary
-
- smart00220
Location:39 → 225
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl21453
Location:31 → 223
- PKc_like; Protein Kinases, catalytic domain
-
XM_017023810.2 → XP_016879299.1 cyclin-dependent kinase 10 isoform X14
- UniProtKB/TrEMBL
-
F8W872
- Conserved Domains (1) summary
-
- cl21453
Location:1 → 257
- PKc_like; Protein Kinases, catalytic domain
-
XM_011523413.3 → XP_011521715.1 cyclin-dependent kinase 10 isoform X11
See identical proteins and their annotated locations for XP_011521715.1
- UniProtKB/TrEMBL
-
F8W872
- Conserved Domains (1) summary
-
- cd07845
Location:1 → 300
- STKc_CDK10; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10
-
XM_047434822.1 → XP_047290778.1 cyclin-dependent kinase 10 isoform X11
-
XM_047434823.1 → XP_047290779.1 cyclin-dependent kinase 10 isoform X11
Alternate T2T-CHM13v2.0
Genomic
-
NC_060940.1 Alternate T2T-CHM13v2.0
- Range
-
95771455..95781117
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054314226.1 → XP_054170201.1 cyclin-dependent kinase 10 isoform X1
-
XM_054314228.1 → XP_054170203.1 cyclin-dependent kinase 10 isoform X3
-
XM_054314227.1 → XP_054170202.1 cyclin-dependent kinase 10 isoform X2
-
XM_054314229.1 → XP_054170204.1 cyclin-dependent kinase 10 isoform X4
-
XM_054314232.1 → XP_054170207.1 cyclin-dependent kinase 10 isoform X7
-
XM_054314231.1 → XP_054170206.1 cyclin-dependent kinase 10 isoform X6
-
XM_054314234.1 → XP_054170209.1 cyclin-dependent kinase 10 isoform X9
-
XM_054314239.1 → XP_054170214.1 cyclin-dependent kinase 10 isoform X11
-
XM_054314236.1 → XP_054170211.1 cyclin-dependent kinase 10 isoform X11
-
XM_054314230.1 → XP_054170205.1 cyclin-dependent kinase 10 isoform X5
-
XM_054314233.1 → XP_054170208.1 cyclin-dependent kinase 10 isoform X8
-
XM_054314235.1 → XP_054170210.1 cyclin-dependent kinase 10 isoform X10
-
XM_054314242.1 → XP_054170217.1 cyclin-dependent kinase 10 isoform X13
-
XM_054314241.1 → XP_054170216.1 cyclin-dependent kinase 10 isoform X12
-
XM_054314244.1 → XP_054170219.1 cyclin-dependent kinase 10 isoform X15
-
XM_054314243.1 → XP_054170218.1 cyclin-dependent kinase 10 isoform X14
-
XM_054314238.1 → XP_054170213.1 cyclin-dependent kinase 10 isoform X11
-
XM_054314237.1 → XP_054170212.1 cyclin-dependent kinase 10 isoform X11
-
XM_054314240.1 → XP_054170215.1 cyclin-dependent kinase 10 isoform X11
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_003674.2: Suppressed sequence
- Description
- NM_003674.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.