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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001145909.2 → NP_001139381.1 protein TANC1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region, compared to variant 1, one of which results in a translational frameshift. The resulting protein (isoform 2) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC009307, AC010093, AL833258, BC150597, DA226268
- UniProtKB/TrEMBL
-
B9EK39
- Conserved Domains (5) summary
-
- PHA03095
Location:898 → 1210
- PHA03095; ankyrin-like protein; Provisional
- COG0457
Location:1254 → 1374
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:1284 → 1309
- TPR; TPR repeat [structural motif]
- sd00045
Location:1137 → 1167
- ANK; ANK repeat [structural motif]
- cl39094
Location:1084 → 1260
- Ank_2; Ankyrin repeats (3 copies)
-
NM_001350062.2 → NP_001336991.1 protein TANC1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) encodes isoform 3.
- Source sequence(s)
-
AC009307, AC010093
- Conserved Domains (4) summary
-
- COG0457
Location:1061 → 1215
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- cd00204
Location:907 → 1030
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00006
Location:1091 → 1116
- TPR; TPR repeat [structural motif]
- sd00045
Location:944 → 974
- ANK; ANK repeat [structural motif]
-
NM_001350063.2 → NP_001336992.1 protein TANC1 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) encodes isoform 4.
- Source sequence(s)
-
AC009307, AC010093
- Conserved Domains (4) summary
-
- COG0457
Location:1139 → 1293
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- cd00204
Location:985 → 1108
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00006
Location:1169 → 1194
- TPR; TPR repeat [structural motif]
- sd00045
Location:1022 → 1052
- ANK; ANK repeat [structural motif]
-
NM_001350064.2 → NP_001336993.1 protein TANC1 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5), as well as variant 6, encodes isoform 5.
- Source sequence(s)
-
AC009307, AC010093
- Conserved Domains (4) summary
-
- COG0457
Location:1255 → 1409
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- cd00204
Location:1101 → 1224
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00006
Location:1285 → 1310
- TPR; TPR repeat [structural motif]
- sd00045
Location:1138 → 1168
- ANK; ANK repeat [structural motif]
-
NM_001350065.2 → NP_001336994.1 protein TANC1 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (6), as well as variant 5, encodes isoform 5.
- Source sequence(s)
-
AC009307, AC010093
- Conserved Domains (4) summary
-
- COG0457
Location:1255 → 1409
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- cd00204
Location:1101 → 1224
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00006
Location:1285 → 1310
- TPR; TPR repeat [structural motif]
- sd00045
Location:1138 → 1168
- ANK; ANK repeat [structural motif]
-
NM_033394.3 → NP_203752.2 protein TANC1 isoform 1
See identical proteins and their annotated locations for NP_203752.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC009307, AK128859, AL833258, BC037329, BC150597, BX648327
- Consensus CDS
-
CCDS42766.1
- UniProtKB/Swiss-Prot
- C9JD88, Q49AI8, Q9C0D5
- Related
- ENSP00000263635.6, ENST00000263635.8
- Conserved Domains (5) summary
-
- PHA03095
Location:906 → 1218
- PHA03095; ankyrin-like protein; Provisional
- COG0457
Location:1262 → 1416
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:1292 → 1317
- TPR; TPR repeat [structural motif]
- sd00045
Location:1145 → 1175
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1116 → 1208
- Ank_2; Ankyrin repeats (3 copies)
RNA
-
NR_146421.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC010093
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
158968640..159232659
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047446107.1 → XP_047302063.1 protein TANC1 isoform X1
-
XM_047446108.1 → XP_047302064.1 protein TANC1 isoform X4
-
XM_047446125.1 → XP_047302081.1 protein TANC1 isoform X20
-
XM_047446126.1 → XP_047302082.1 protein TANC1 isoform X22
-
XM_017005141.2 → XP_016860630.2 protein TANC1 isoform X2
-
XM_047446109.1 → XP_047302065.1 protein TANC1 isoform X5
-
XM_017005152.2 → XP_016860641.2 protein TANC1 isoform X21
-
XM_047446118.1 → XP_047302074.1 protein TANC1 isoform X14
-
XM_047446120.1 → XP_047302076.1 protein TANC1 isoform X16
-
XM_047446130.1 → XP_047302086.1 protein TANC1 isoform X26
-
XM_047446111.1 → XP_047302067.1 protein TANC1 isoform X7
-
XM_047446114.1 → XP_047302070.1 protein TANC1 isoform X9
-
XM_047446127.1 → XP_047302083.1 protein TANC1 isoform X23
-
XM_047446128.1 → XP_047302084.1 protein TANC1 isoform X24
-
XM_047446112.1 → XP_047302068.1 protein TANC1 isoform X8
-
XM_047446115.1 → XP_047302071.1 protein TANC1 isoform X10
-
XM_006712814.4 → XP_006712877.1 protein TANC1 isoform X31
- Conserved Domains (8) summary
-
- cd00204
Location:924 → 1047
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00006
Location:1108 → 1133
- TPR; TPR repeat [structural motif]
- pfam12796
Location:932 → 1024
- Ank_2; Ankyrin repeats (3 copies)
- pfam13191
Location:201 → 243
- AAA_16; AAA ATPase domain
- pfam13414
Location:1106 → 1183
- TPR_11; TPR repeat
- pfam13428
Location:1187 → 1229
- TPR_14; Tetratricopeptide repeat
- pfam13637
Location:754 → 803
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:961 → 991
- ANK; ANK repeat [structural motif]
-
XM_047446121.1 → XP_047302077.1 protein TANC1 isoform X17
-
XM_011512053.3 → XP_011510355.1 protein TANC1 isoform X6
See identical proteins and their annotated locations for XP_011510355.1
- Conserved Domains (8) summary
-
- cd00204
Location:1126 → 1249
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00006
Location:1310 → 1335
- TPR; TPR repeat [structural motif]
- pfam12796
Location:1134 → 1226
- Ank_2; Ankyrin repeats (3 copies)
- pfam13191
Location:403 → 445
- AAA_16; AAA ATPase domain
- pfam13414
Location:1308 → 1385
- TPR_11; TPR repeat
- pfam13428
Location:1389 → 1431
- TPR_14; Tetratricopeptide repeat
- pfam13637
Location:956 → 1005
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:1163 → 1193
- ANK; ANK repeat [structural motif]
-
XM_006712810.4 → XP_006712873.1 protein TANC1 isoform X11
See identical proteins and their annotated locations for XP_006712873.1
- UniProtKB/Swiss-Prot
- C9JD88, Q49AI8, Q9C0D5
- Conserved Domains (5) summary
-
- PHA03095
Location:906 → 1218
- PHA03095; ankyrin-like protein; Provisional
- COG0457
Location:1262 → 1416
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:1292 → 1317
- TPR; TPR repeat [structural motif]
- sd00045
Location:1145 → 1175
- ANK; ANK repeat [structural motif]
- pfam12796
Location:1116 → 1208
- Ank_2; Ankyrin repeats (3 copies)
-
XM_047446117.1 → XP_047302073.1 protein TANC1 isoform X13
-
XM_047446124.1 → XP_047302080.1 protein TANC1 isoform X19
-
XM_047446129.1 → XP_047302085.1 protein TANC1 isoform X25
-
XM_047446116.1 → XP_047302072.1 protein TANC1 isoform X12
-
XM_047446119.1 → XP_047302075.1 protein TANC1 isoform X15
-
XM_047446131.1 → XP_047302087.1 protein TANC1 isoform X27
-
XM_047446134.1 → XP_047302090.1 protein TANC1 isoform X29
-
XM_047446122.1 → XP_047302078.1 protein TANC1 isoform X18
-
XM_047446136.1 → XP_047302092.1 protein TANC1 isoform X32
-
XM_047446110.1 → XP_047302066.1 protein TANC1 isoform X6
-
XM_017005143.3 → XP_016860632.1 protein TANC1 isoform X3
-
XM_047446132.1 → XP_047302088.1 protein TANC1 isoform X28
-
XM_011512059.3 → XP_011510361.1 protein TANC1 isoform X30
- Conserved Domains (8) summary
-
- cd00204
Location:944 → 1067
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- sd00006
Location:1128 → 1153
- TPR; TPR repeat [structural motif]
- pfam12796
Location:952 → 1044
- Ank_2; Ankyrin repeats (3 copies)
- pfam13191
Location:221 → 263
- AAA_16; AAA ATPase domain
- pfam13414
Location:1126 → 1203
- TPR_11; TPR repeat
- pfam13428
Location:1207 → 1249
- TPR_14; Tetratricopeptide repeat
- pfam13637
Location:774 → 823
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:981 → 1011
- ANK; ANK repeat [structural motif]
-
XM_047446135.1 → XP_047302091.1 protein TANC1 isoform X30
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
159430678..159692453
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054344267.1 → XP_054200242.1 protein TANC1 isoform X1
-
XM_054344270.1 → XP_054200245.1 protein TANC1 isoform X4
-
XM_054344287.1 → XP_054200262.1 protein TANC1 isoform X20
-
XM_054344289.1 → XP_054200264.1 protein TANC1 isoform X22
-
XM_054344268.1 → XP_054200243.1 protein TANC1 isoform X2
-
XM_054344271.1 → XP_054200246.1 protein TANC1 isoform X5
-
XM_054344288.1 → XP_054200263.1 protein TANC1 isoform X21
-
XM_054344281.1 → XP_054200256.1 protein TANC1 isoform X14
-
XM_054344283.1 → XP_054200258.1 protein TANC1 isoform X16
-
XM_054344293.1 → XP_054200268.1 protein TANC1 isoform X26
-
XM_054344274.1 → XP_054200249.1 protein TANC1 isoform X7
-
XM_054344276.1 → XP_054200251.1 protein TANC1 isoform X9
-
XM_054344290.1 → XP_054200265.1 protein TANC1 isoform X23
-
XM_054344291.1 → XP_054200266.1 protein TANC1 isoform X24
-
XM_054344275.1 → XP_054200250.1 protein TANC1 isoform X8
-
XM_054344277.1 → XP_054200252.1 protein TANC1 isoform X10
-
XM_054344298.1 → XP_054200273.1 protein TANC1 isoform X31
-
XM_054344284.1 → XP_054200259.1 protein TANC1 isoform X17
-
XM_054344273.1 → XP_054200248.1 protein TANC1 isoform X6
-
XM_054344278.1 → XP_054200253.1 protein TANC1 isoform X11
-
XM_054344280.1 → XP_054200255.1 protein TANC1 isoform X13
-
XM_054344286.1 → XP_054200261.1 protein TANC1 isoform X19
-
XM_054344292.1 → XP_054200267.1 protein TANC1 isoform X25
-
XM_054344279.1 → XP_054200254.1 protein TANC1 isoform X12
-
XM_054344282.1 → XP_054200257.1 protein TANC1 isoform X15
-
XM_054344294.1 → XP_054200269.1 protein TANC1 isoform X27
-
XM_054344296.1 → XP_054200271.1 protein TANC1 isoform X29
-
XM_054344285.1 → XP_054200260.1 protein TANC1 isoform X18
-
XM_054344300.1 → XP_054200275.1 protein TANC1 isoform X32
-
XM_054344272.1 → XP_054200247.1 protein TANC1 isoform X6
-
XM_054344269.1 → XP_054200244.1 protein TANC1 isoform X3
-
XM_054344295.1 → XP_054200270.1 protein TANC1 isoform X28
-
XM_054344297.1 → XP_054200272.1 protein TANC1 isoform X30
-
XM_054344299.1 → XP_054200274.1 protein TANC1 isoform X33