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    LOC8272569 diacylglycerol O-acyltransferase 1 [ Ricinus communis (castor bean) ]

    Gene ID: 8272569, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8272569
    Gene description
    diacylglycerol O-acyltransferase 1
    Locus tag
    RCOM_1047540
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
    Also known as
    DGAT; DGAT1
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    Genomic context

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    See LOC8272569 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 3 NC_063258.1 (28187074..28195129)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994288.1 (502792..510328, complement)

    Chromosome 3 - NC_063258.1Genomic Context describing neighboring genes Neighboring gene THO complex subunit 6 Neighboring gene eukaryotic initiation factor 4A-1 Neighboring gene uncharacterized LOC8272568 Neighboring gene casein kinase 1-like protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of a cDNA encoding diacylglycerol acyltransferase from castor bean. He X, et al. Lipids, 2004 Apr. PMID 15357018
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables diacylglycerol O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in triglyceride biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    diacylglycerol O-acyltransferase 1
    Names
    diacylglycerol acyltransferase type-1
    type 1 diacylglycerol acyltransferase
    NP_001310663.1
    XP_048227474.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001323734.2 → NP_001310663.1  diacylglycerol O-acyltransferase 1

      Status: PROVISIONAL

      Source sequence(s)
      EU391591
      UniProtKB/TrEMBL
      Q67C39
      Conserved Domains (1) summary
      PLN02401
      Location:82 → 521
      PLN02401; diacylglycerol o-acyltransferase

    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063258.1 Reference ASM1957865v1

      Range
      28187074..28195129
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048371517.1 → XP_048227474.1  diacylglycerol O-acyltransferase 1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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