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    LOC8271760 stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic [ Ricinus communis (castor bean) ]

    Gene ID: 8271760, updated on 26-Jun-2024

    Summary

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    Gene symbol
    LOC8271760
    Gene description
    stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
    Locus tag
    RCOM_1238330
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8271760 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 8 NC_063263.1 (18206298..18211932, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994822.1 (20233..25869, complement)

    Chromosome 8 - NC_063263.1Genomic Context describing neighboring genes Neighboring gene fasciclin-like arabinogalactan protein 4 Neighboring gene protein TRM32 Neighboring gene protein IQ-DOMAIN 14 Neighboring gene uncharacterized LOC8271764

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Castor Stearoyl-ACP Desaturase Can Synthesize a Vicinal Diol by Dioxygenase Chemistry. Whittle EJ, et al. Plant Physiol, 2020 Feb. PMID 31806737, Free PMC Article
    2. Nucleotide Sequence of a Complementary DNA Clone Encoding Stearoyl-Acyl Carrier Protein Desaturase from Castor Bean, Ricinus communis. Knutzon DS, et al. Plant Physiol, 1991 May. PMID 16668180, Free PMC Article
    3. Stearoyl-acyl-carrier-protein desaturase from higher plants is structurally unrelated to the animal and fungal homologs. Shanklin J, et al. Proc Natl Acad Sci U S A, 1991 Mar 15. PMID 2006187, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Castor Stearoyl-ACP Desaturase Can Synthesize a Vicinal Diol by Dioxygenase Chemistry.
      Title: Castor Stearoyl-ACP Desaturase Can Synthesize a Vicinal Diol by Dioxygenase Chemistry.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables stearoyl-CoA 9-desaturase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables stearoyl-[ACP] desaturase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast stroma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
    Names
    Acyl-[acyl-carrier-protein] desaturase
    Delta(9) stearoyl-acyl carrier protein desaturase
    Stearoy-ACP desaturase
    Stearoyl-ACP desaturase
    acyl-[acyl-carrier protein] desatu
    stearol-acyl-carrier protein desaturase
    stearoyl-acyl-carrier protein desaturase
    NP_001310659.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001323730.1 → NP_001310659.1  stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic precursor

      Status: PROVISIONAL

      Source sequence(s)
      X56508
      UniProtKB/Swiss-Prot
      P22337
      UniProtKB/TrEMBL
      B9T0X0
      Conserved Domains (1) summary
      PLN00179
      Location:3 → 396
      PLN00179; acyl- [acyl-carrier protein] desaturase

    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063263.1 Reference ASM1957865v1

      Range
      18206298..18211932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P22337.1 GenPept UniProtKB/Swiss-Prot:P22337

    Gene LinkOut

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